OK 2026-06-19T00:51:40.563218 https://biocase.zfmk.de/biocase/pywrapper.cgi?dsa=ZMH-Collections-v2 ZMH Annelida collection ZMH Annelida collection https://biocase.zfmk.de/biocase/downloads/ZMH-Collections-v2/ZMH%20Annelida%20collection.ABCD_GGBN.zip https://biocase.zfmk.de/biocase/downloads/ZMH-Collections-v2/ZMH%20Annelida%20collection.ABCD_2.06.zip ZMH Arachnology collection ZMH Arachnology collection https://biocase.zfmk.de/biocase/downloads/ZMH-Collections-v2/ZMH%20Arachnology%20collection.ABCD_GGBN.zip https://biocase.zfmk.de/biocase/downloads/ZMH-Collections-v2/ZMH%20Arachnology%20collection.ABCD_2.06.zip ZMH Crustacea collection ZMH Crustacea collection https://biocase.zfmk.de/biocase/downloads/ZMH-Collections-v2/ZMH%20Crustacea%20collection.ABCD_2.06.zip https://biocase.zfmk.de/biocase/downloads/ZMH-Collections-v2/ZMH%20Crustacea%20collection.ABCD_GGBN.zip ZMH Ichthyology collection ZMH Ichthyology collection https://biocase.zfmk.de/biocase/downloads/ZMH-Collections-v2/ZMH%20Ichthyology%20collection.ABCD_2.06.zip https://biocase.zfmk.de/biocase/downloads/ZMH-Collections-v2/ZMH%20Ichthyology%20collection.ABCD_GGBN.zip ZMH Lepidoptera collection ZMH Lepidoptera collection https://biocase.zfmk.de/biocase/downloads/ZMH-Collections-v2/ZMH%20Lepidoptera%20collection.ABCD_GGBN.zip https://biocase.zfmk.de/biocase/downloads/ZMH-Collections-v2/ZMH%20Lepidoptera%20collection.ABCD_2.06.zip ZMH Mammalia collection ZMH Mammalia collection https://biocase.zfmk.de/biocase/downloads/ZMH-Collections-v2/ZMH%20Mammalia%20collection.ABCD_GGBN.zip https://biocase.zfmk.de/biocase/downloads/ZMH-Collections-v2/ZMH%20Mammalia%20collection.ABCD_2.06.zip ZMH Ornithology collection ZMH Ornithology collection https://biocase.zfmk.de/biocase/downloads/ZMH-Collections-v2/ZMH%20Ornithology%20collection.ABCD_GGBN.zip https://biocase.zfmk.de/biocase/downloads/ZMH-Collections-v2/ZMH%20Ornithology%20collection.ABCD_2.06.zip ZMH Trichoptera collection ZMH Trichoptera collection https://biocase.zfmk.de/biocase/downloads/ZMH-Collections-v2/ZMH%20Trichoptera%20collection.ABCD_GGBN.zip https://biocase.zfmk.de/biocase/downloads/ZMH-Collections-v2/ZMH%20Trichoptera%20collection.ABCD_2.06.zip Datasource wrapper ZMH-Collections-v2 requested Reading PSF from /opt/biocase/config/datasources/ZMH-Collections-v2/provider_setup_file.xml PSF: PSF=/opt/biocase/config/datasources/ZMH-Collections-v2/provider_setup_file.xml, recLimit=1000, loglevel=10, user=biocase, database=BioCASe_ZMH_Collections_v2, dbIP=mysql, dbms=mysql, encoding=utf_8, schemas={'http://www.tdwg.org/schemas/abcd/2.1': <biocase.wrapper.psf_handler.SupportedSchema object at 0x7893464d4e80>, 'http://www.tdwg.org/schemas/abcd/2.06': <biocase.wrapper.psf_handler.SupportedSchema object at 0x7893464d4eb0>}, tablegraph=GRAPH: graph: AssociatedMorphUnits-Unit, CollectionAgent-CollectionSpecimen, CollectionEventLocalisation-CollectionEvent, CollectionEventNamedAreas-CollectionEvent, CollectionSpecimenImage-Unit, DNASample_Amplification-Unit, DNASample_AmplificationPrimer-DNASample_Amplification, DNASample_Sequence-DNASample_Amplification, DNASample_Trace-DNASample_Sequence, HigherTaxonMap-HigherTaxon, Identification-HigherTaxonMap, Measurements-Unit, PublicDatabase-DNASample_Amplification, SpecimenHistory-Unit, Unit-CollectionEvent, Unit-Identification, Unit-CollectionSpecimen, Unit-metadata, UnitContentContact-Unit, +++ ALIAS2TABLE: {'AssociatedMorphUnits': 'v_AssociatedMorphUnits', 'CollectionAgent': 'CollectionAgent', 'CollectionEvent': 'v_CollectionEvent', 'CollectionEventLocalisation': 'v_CollectionEventLocalisation', 'CollectionEventNamedAreas': 'v_CollectionEventNamedAreas', 'CollectionSpecimen': 'CollectionSpecimen', 'CollectionSpecimenImage': 'v_CollectionSpecimenImage', 'DNASample_Amplification': 'v_DNASample_Amplification', 'DNASample_AmplificationPrimer': 'v_DNASample_AmplificationPrimer', 'DNASample_Sequence': 'v_DNASample_Sequence', 'DNASample_Trace': 'v_DNASample_Trace', 'HigherTaxon': 'HigherTaxon', 'HigherTaxonMap': 'HigherTaxonMap', 'Identification': 'v_Identification', 'Measurements': 'v_Measurements', 'PublicDatabase': 'v_PublicDatabase', 'SpecimenHistory': 'SpecimenHistory', 'Unit': 'v2_Unit_all', 'UnitContentContact': 'v_CollectionAdministrativeContact', 'metadata': 'metadata'} pywInstance.parseRequest... Namespace parameter for dataset inventory not found; trying to find the most likely schema. CMFList: Trying to add file /opt/biocase/config/datasources/ZMH-Collections-v2/cmf_ABCD_GGBN.xml Load CMFile '/opt/biocase/config/datasources/ZMH-Collections-v2/cmf_ABCD_GGBN.xml' Cache filename: /opt/biocase/cache/config/datasources/ZMH-Collections-v2/cmf_ABCD_GGBN.xml.pick Load the pickled CMF object 'cmf_ABCD_GGBN.xml.pick' Pickled file is of latest revision. Added. Name=ABCD_GGBN.xml CMFList: Trying to add file /opt/biocase/config/datasources/ZMH-Collections-v2/cmf_ABCD_2.06.xml Load CMFile '/opt/biocase/config/datasources/ZMH-Collections-v2/cmf_ABCD_2.06.xml' Cache filename: /opt/biocase/cache/config/datasources/ZMH-Collections-v2/cmf_ABCD_2.06.xml.pick Load the pickled CMF object 'cmf_ABCD_2.06.xml.pick' Pickled file is of latest revision. Added. Name=ABCD_2.06.xml Namespace parameter for dataset inventory set to http://www.tdwg.org/schemas/abcd/2.1. parse request BioCASe Request: Type=scan, reqSchema=http://www.tdwg.org/schemas/abcd/2.1, resSchema=, filter=None, count=0, start=0, limit=0, scan element=/DataSets/DataSet/Metadata/Description/Representation/Title, doc=<?xml version='1.0' encoding='UTF-8'?> <request xmlns='http://www.biocase.org/schemas/protocol/1.3'> <header><type>scan</type></header> <scan> <requestFormat>http://www.tdwg.org/schemas/abcd/2.1</requestFormat> <concept>/DataSets/DataSet/Metadata/Description/Representation/Title</concept> </scan> </request> pywInstance.doResponse... DO_RESPONSE: process request Dataset Inventory for namespace http://www.tdwg.org/schemas/abcd/2.1 requested. Executing Scan on Dataset Title. Error handler for encoding/decoding exceptions has been set Using utf8 encoding. Try to get CMF for namespace http://www.tdwg.org/schemas/abcd/2.1 Load CMFile '/opt/biocase/config/datasources/ZMH-Collections-v2/cmf_ABCD_GGBN.xml' Cache filename: /opt/biocase/cache/config/datasources/ZMH-Collections-v2/cmf_ABCD_GGBN.xml.pick Load the pickled CMF object 'cmf_ABCD_GGBN.xml.pick' Pickled file is of latest revision. Global CMF Filters integrated into the SQL: () Original filter string parsed: <?xml version='1.0' encoding='UTF-8'?> <request xmlns='http://www.biocase.org/schemas/protocol/1.3'> <header><type>scan</type></header> <scan> <requestFormat>http://www.tdwg.org/schemas/abcd/2.1</requestFormat> <concept>/DataSets/DataSet/Metadata/Description/Representation/Title</concept> </scan> </request> Scan mapping metadata.description_title(text) Select Distinct List: [metadata.description_title(text)] Swapped COP args at node metadata to build correct Left Joins Executing SQL: 'SELECT DISTINCT metadata.description_title FROM v2_Unit_all AS Unit LEFT JOIN metadata AS metadata ON (metadata.ProjectID = Unit.ProjectID) ORDER BY metadata.description_title' with parameters: '' start DB query end DB query Hits: 8 Scan operation succeeded. Listing archives for datasets ['ZMH Annelida collection', 'ZMH Arachnology collection', 'ZMH Crustacea collection', 'ZMH Ichthyology collection', 'ZMH Lepidoptera collection', 'ZMH Mammalia collection', 'ZMH Ornithology collection', 'ZMH Trichoptera collection']. DO_RESPONSE: postprocess